Banner

Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs12778891 chr10:950130 T/A 5.04E-5 398 14.75 17.03 12.17 KM Plot
LGG rs12809946 chr12:69712608 T/G 0.000179 399 14.95 14.77 16.73 KM Plot
LGG rs12885777 chr14:23323808 C/T 2.26E-5 395 11.43 15.43 15.93 KM Plot
LGG rs12899987 chr15:31870453 A/G 1.2E-5 407 15.27 15.3 15.05 KM Plot
LGG rs12907720 chr15:31897012 C/T 0.000161 407 13.58 15.17 15.83 KM Plot
LGG rs12912967 chr15:31961672 A/G 0.000167 402 15.77 15.2 11.8 KM Plot
LGG rs13000280 chr2:84696996 A/G 0.000135 407 9.03 15.73 15.32 KM Plot
LGG rs13036554 chr20:44778412 A/G 0 401 15.83 13.83 1.23 KM Plot
LGG rs13041203 chr20:44778778 T/C 0 390 15.7 14.97 1.23 KM Plot
LGG rs13050554 chr21:45579901 A/G 4.64E-6 400 4.43 12.17 15.57 KM Plot
LGG rs13054299 chr22:25182381 C/T 2.25E-5 388 15.02 15.3 17.2 KM Plot
LGG rs13056159 chr22:42820207 G/A 6.12E-8 403 15.3 16.23 4.4 KM Plot
LGG rs13065599 chr3:187632967 G/A 7.92E-5 396 14.8 18.33 8.07 KM Plot
LGG rs13075660 chr3:108772585 C/T 0.00013 407 15.27 17.07 3.87 KM Plot
LGG rs13087883 chr3:38871520 C/T 1.32E-5 402 15.15 16.47 11.63 KM Plot